Failed to execute the [velocity] macro. Click on this message for details.org.xwiki.rendering.macro.MacroExecutionException: Failed to evaluate Velocity Macro for content [{{{ #set ($codeProperties = ['phenotype', 'negative_phenotype', 'prenatal_phenotype', 'omim_id']) #set ($nonPatientClassProperties = ['doc.name', 'referrer', 'author', 'creationDate', 'date', 'genes', 'genes_status', 'genes_strategy', 'genes_comments', "variants", "variants_protein", "variants_transcript", "variants_dbsnp", "variants_zygosity", "variants_effect", "variants_interpretation", "variants_inheritance", "variants_evidence", "variants_segregation", "variants_sanger"]) #set ($enabledFields = $request.getParameterValues('columns')) #set ($displayedFields = []) #set ($allFields = $nonPatientClassProperties) #set ($discard = $allFields.addAll($activeFields)) #foreach ($field in $allFields) #if ($enabledFields.contains($field)) #set ($discard = $displayedFields.add($field)) #elseif ($codeProperties.contains($field) && ($enabledFields.contains("${field}_code") || $enabledFields.contains("${field}_combined") || $enabledFields.contains("${field}_code_meta") || $enabledFields.contains("${field}_meta"))) #set ($discard = $displayedFields.add($field)) #end #end $response.addHeader("Content-disposition", "attachment; filename=phenotips_${xwiki.formatDate($util.date, 'yyyy-MM-dd_HH-mm')}.json")## $response.setContentType('application/json')## [## Opening JSON array brace #set($isFirst = true) #foreach ($patientId in $patientIds) #set ($patientDoc = $xwiki.getDocument($patientId)) #set ($patient = $services.patients.getPatientById($patientId)) #if ($patientDoc && $patient) #set ($JSON = $patient.toJSON($displayedFields)) #if ($isFirst) #set($isFirst = false) #else ,## #end $JSON #end## Patient is accessible #end ]## Closing JSON array brace }}}] at org.xwiki.rendering.internal.macro.velocity.VelocityMacro.evaluateString(VelocityMacro.java:131) at org.xwiki.rendering.internal.macro.velocity.VelocityMacro.evaluateString(VelocityMacro.java:50) at org.xwiki.rendering.macro.script.AbstractScriptMacro.evaluateBlock(AbstractScriptMacro.java:286) at org.xwiki.rendering.macro.script.AbstractScriptMacro.execute(AbstractScriptMacro.java:182) at org.xwiki.rendering.macro.script.AbstractScriptMacro.execute(AbstractScriptMacro.java:58) at org.xwiki.rendering.internal.transformation.macro.MacroTransformation.transform(MacroTransformation.java:269) at org.xwiki.rendering.internal.transformation.DefaultRenderingContext.transformInContext(DefaultRenderingContext.java:183) at org.xwiki.rendering.internal.transformation.DefaultTransformationManager.performTransformations(DefaultTransformationManager.java:94) at org.xwiki.display.internal.DocumentContentDisplayer.display(DocumentContentDisplayer.java:252) at org.xwiki.display.internal.DocumentContentDisplayer.display(DocumentContentDisplayer.java:125) at org.xwiki.display.internal.DocumentContentDisplayer.display(DocumentContentDisplayer.java:55) at org.xwiki.display.internal.DefaultDocumentDisplayer.display(DefaultDocumentDisplayer.java:96) at org.xwiki.display.internal.DefaultDocumentDisplayer.display(DefaultDocumentDisplayer.java:39) at org.xwiki.sheet.internal.SheetDocumentDisplayer.display(SheetDocumentDisplayer.java:113) at org.xwiki.sheet.internal.SheetDocumentDisplayer.display(SheetDocumentDisplayer.java:50) at org.xwiki.display.internal.ConfiguredDocumentDisplayer.display(ConfiguredDocumentDisplayer.java:67) at org.xwiki.display.internal.ConfiguredDocumentDisplayer.display(ConfiguredDocumentDisplayer.java:41) at com.xpn.xwiki.doc.XWikiDocument.getRenderedContent(XWikiDocument.java:1167) at com.xpn.xwiki.doc.XWikiDocument.getRenderedContent(XWikiDocument.java:1132) at com.xpn.xwiki.api.Document.getRenderedContent(Document.java:739) at sun.reflect.GeneratedMethodAccessor564.invoke(Unknown Source) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.apache.velocity.util.introspection.UberspectImpl$VelMethodImpl.doInvoke(UberspectImpl.java:395) at org.apache.velocity.util.introspection.UberspectImpl$VelMethodImpl.invoke(UberspectImpl.java:384) at org.apache.velocity.runtime.parser.node.ASTMethod.execute(ASTMethod.java:173) at org.apache.velocity.runtime.parser.node.ASTReference.execute(ASTReference.java:280) at org.apache.velocity.runtime.parser.node.ASTReference.render(ASTReference.java:369) at org.apache.velocity.runtime.parser.node.ASTBlock.render(ASTBlock.java:72) at org.apache.velocity.runtime.parser.node.ASTIfStatement.render(ASTIfStatement.java:87) at org.apache.velocity.runtime.parser.node.SimpleNode.render(SimpleNode.java:342) at org.xwiki.velocity.internal.DefaultVelocityEngine.evaluateInternal(DefaultVelocityEngine.java:256) at org.xwiki.velocity.internal.DefaultVelocityEngine.evaluate(DefaultVelocityEngine.java:222) at org.xwiki.velocity.internal.DefaultVelocityEngine.evaluate(DefaultVelocityEngine.java:198) at com.xpn.xwiki.internal.template.InternalTemplateManager.evaluateContent(InternalTemplateManager.java:729) at com.xpn.xwiki.internal.template.InternalTemplateManager.render(InternalTemplateManager.java:627) at com.xpn.xwiki.internal.template.InternalTemplateManager.renderFromSkin(InternalTemplateManager.java:605) at com.xpn.xwiki.internal.template.InternalTemplateManager.renderFromSkin(InternalTemplateManager.java:571) at com.xpn.xwiki.internal.template.InternalTemplateManager.render(InternalTemplateManager.java:557) at com.xpn.xwiki.internal.template.DefaultTemplateManager.render(DefaultTemplateManager.java:65) at com.xpn.xwiki.XWiki.evaluateTemplate(XWiki.java:1759) at com.xpn.xwiki.XWiki.parseTemplate(XWiki.java:1737) at com.xpn.xwiki.api.XWiki.parseTemplate(XWiki.java:797) at sun.reflect.GeneratedMethodAccessor185.invoke(Unknown Source) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.apache.velocity.util.introspection.UberspectImpl$VelMethodImpl.doInvoke(UberspectImpl.java:395) at org.apache.velocity.util.introspection.UberspectImpl$VelMethodImpl.invoke(UberspectImpl.java:384) at org.apache.velocity.runtime.parser.node.ASTMethod.execute(ASTMethod.java:173) at org.apache.velocity.runtime.parser.node.ASTReference.execute(ASTReference.java:280) at org.apache.velocity.runtime.parser.node.ASTReference.render(ASTReference.java:369) at org.apache.velocity.runtime.parser.node.ASTBlock.render(ASTBlock.java:72) at org.apache.velocity.runtime.directive.VelocimacroProxy.render(VelocimacroProxy.java:216) at org.apache.velocity.runtime.directive.RuntimeMacro.render(RuntimeMacro.java:311) at org.apache.velocity.runtime.directive.RuntimeMacro.render(RuntimeMacro.java:230) at org.apache.velocity.runtime.parser.node.ASTDirective.render(ASTDirective.java:207) at org.apache.velocity.runtime.parser.node.SimpleNode.render(SimpleNode.java:342) at org.xwiki.velocity.internal.DefaultVelocityEngine.evaluateInternal(DefaultVelocityEngine.java:256) at org.xwiki.velocity.internal.DefaultVelocityEngine.evaluate(DefaultVelocityEngine.java:222) at org.xwiki.velocity.internal.DefaultVelocityEngine.evaluate(DefaultVelocityEngine.java:198) at com.xpn.xwiki.internal.template.InternalTemplateManager.evaluateContent(InternalTemplateManager.java:729) at com.xpn.xwiki.internal.template.InternalTemplateManager.render(InternalTemplateManager.java:627) at com.xpn.xwiki.internal.template.InternalTemplateManager.renderFromSkin(InternalTemplateManager.java:605) at com.xpn.xwiki.internal.template.InternalTemplateManager.renderFromSkin(InternalTemplateManager.java:571) at com.xpn.xwiki.internal.template.InternalTemplateManager.render(InternalTemplateManager.java:557) at com.xpn.xwiki.internal.template.DefaultTemplateManager.render(DefaultTemplateManager.java:65) at com.xpn.xwiki.XWiki.evaluateTemplate(XWiki.java:1759) at com.xpn.xwiki.XWiki.parseTemplate(XWiki.java:1737) at com.xpn.xwiki.api.XWiki.parseTemplate(XWiki.java:797) at sun.reflect.GeneratedMethodAccessor185.invoke(Unknown Source) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.apache.velocity.util.introspection.UberspectImpl$VelMethodImpl.doInvoke(UberspectImpl.java:395) at org.apache.velocity.util.introspection.UberspectImpl$VelMethodImpl.invoke(UberspectImpl.java:384) at org.apache.velocity.runtime.parser.node.ASTMethod.execute(ASTMethod.java:173) at org.apache.velocity.runtime.parser.node.ASTReference.execute(ASTReference.java:280) at org.apache.velocity.runtime.parser.node.ASTReference.render(ASTReference.java:369) at org.apache.velocity.runtime.parser.node.ASTBlock.render(ASTBlock.java:72) at org.apache.velocity.runtime.directive.VelocimacroProxy.render(VelocimacroProxy.java:216) at org.apache.velocity.runtime.directive.RuntimeMacro.render(RuntimeMacro.java:311) at org.apache.velocity.runtime.directive.RuntimeMacro.render(RuntimeMacro.java:230) at org.apache.velocity.runtime.parser.node.ASTDirective.render(ASTDirective.java:207) at org.apache.velocity.runtime.parser.node.SimpleNode.render(SimpleNode.java:342) at org.xwiki.velocity.internal.DefaultVelocityEngine.evaluateInternal(DefaultVelocityEngine.java:256) at org.xwiki.velocity.internal.DefaultVelocityEngine.evaluate(DefaultVelocityEngine.java:222) at org.xwiki.velocity.internal.DefaultVelocityEngine.evaluate(DefaultVelocityEngine.java:198) at com.xpn.xwiki.internal.template.InternalTemplateManager.evaluateContent(InternalTemplateManager.java:729) at com.xpn.xwiki.internal.template.InternalTemplateManager.render(InternalTemplateManager.java:627) at com.xpn.xwiki.internal.template.InternalTemplateManager.renderFromSkin(InternalTemplateManager.java:605) at com.xpn.xwiki.internal.template.InternalTemplateManager.renderFromSkin(InternalTemplateManager.java:571) at com.xpn.xwiki.internal.template.InternalTemplateManager.render(InternalTemplateManager.java:557) at com.xpn.xwiki.internal.template.DefaultTemplateManager.render(DefaultTemplateManager.java:65) at com.xpn.xwiki.XWiki.evaluateTemplate(XWiki.java:1759) at com.xpn.xwiki.web.Utils.parseTemplate(Utils.java:180) at com.xpn.xwiki.web.XWikiAction.execute(XWikiAction.java:422) at com.xpn.xwiki.web.XWikiAction.execute(XWikiAction.java:180) at org.apache.struts.action.RequestProcessor.processActionPerform(RequestProcessor.java:425) at org.apache.struts.action.RequestProcessor.process(RequestProcessor.java:228) at org.apache.struts.action.ActionServlet.process(ActionServlet.java:1913) at org.apache.struts.action.ActionServlet.doPost(ActionServlet.java:462) at javax.servlet.http.HttpServlet.service(HttpServlet.java:646) at javax.servlet.http.HttpServlet.service(HttpServlet.java:727) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:303) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208) at com.xpn.xwiki.web.ActionFilter.doFilter(ActionFilter.java:115) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208) at org.apache.tomcat.websocket.server.WsFilter.doFilter(WsFilter.java:52) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208) at org.xwiki.container.servlet.filters.internal.SavedRequestRestorerFilter.doFilter(SavedRequestRestorerFilter.java:208) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208) at org.xwiki.container.servlet.filters.internal.SetCharacterEncodingFilter.doFilter(SetCharacterEncodingFilter.java:111) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208) at org.tuckey.web.filters.urlrewrite.RuleChain.handleRewrite(RuleChain.java:176) at org.tuckey.web.filters.urlrewrite.RuleChain.doRules(RuleChain.java:145) at org.tuckey.web.filters.urlrewrite.UrlRewriter.processRequest(UrlRewriter.java:92) at org.tuckey.web.filters.urlrewrite.UrlRewriteFilter.doFilter(UrlRewriteFilter.java:389) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208) at org.apache.catalina.core.ApplicationDispatcher.invoke(ApplicationDispatcher.java:748) at org.apache.catalina.core.ApplicationDispatcher.processRequest(ApplicationDispatcher.java:486) at org.apache.catalina.core.ApplicationDispatcher.doForward(ApplicationDispatcher.java:411) at org.apache.catalina.core.ApplicationDispatcher.forward(ApplicationDispatcher.java:338) at org.tuckey.web.filters.urlrewrite.NormalRewrittenUrl.doRewrite(NormalRewrittenUrl.java:213) at org.tuckey.web.filters.urlrewrite.RuleChain.handleRewrite(RuleChain.java:171) at org.tuckey.web.filters.urlrewrite.RuleChain.doRules(RuleChain.java:145) at org.tuckey.web.filters.urlrewrite.UrlRewriter.processRequest(UrlRewriter.java:92) at org.tuckey.web.filters.urlrewrite.UrlRewriteFilter.doFilter(UrlRewriteFilter.java:389) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208) at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:220) at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:122) at org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:501) at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:171) at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:102) at org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:950) at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:116) at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:408) at org.apache.coyote.ajp.AjpProcessor.process(AjpProcessor.java:193) at org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(AbstractProtocol.java:607) at org.apache.tomcat.util.net.JIoEndpoint$SocketProcessor.run(JIoEndpoint.java:314) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617) at org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(TaskThread.java:61) at java.lang.Thread.run(Thread.java:745) Caused by: org.xwiki.velocity.XWikiVelocityException: Failed to evaluate content with id [xwiki:PhenoTips.ExportJSON] at org.xwiki.velocity.internal.DefaultVelocityEngine.evaluate(DefaultVelocityEngine.java:224) at org.xwiki.velocity.internal.DefaultVelocityEngine.evaluate(DefaultVelocityEngine.java:198) at org.xwiki.rendering.internal.macro.velocity.VelocityMacro.evaluateString(VelocityMacro.java:124) ... 147 more Caused by: org.apache.velocity.exception.VelocityException: Reference evaluation threw an exception at 364:xwiki:PhenoTips.ExportJSON[line 24, column 21] at org.apache.velocity.runtime.parser.node.ASTReference.evaluate(ASTReference.java:551) at org.apache.velocity.runtime.parser.node.ASTAndNode.evaluate(ASTAndNode.java:106) at org.apache.velocity.runtime.parser.node.ASTExpression.evaluate(ASTExpression.java:62) at org.apache.velocity.runtime.parser.node.ASTIfStatement.render(ASTIfStatement.java:85) at org.apache.velocity.runtime.parser.node.ASTBlock.render(ASTBlock.java:72) at org.apache.velocity.runtime.directive.Foreach.render(Foreach.java:420) at org.apache.velocity.runtime.parser.node.ASTDirective.render(ASTDirective.java:207) at org.apache.velocity.runtime.parser.node.SimpleNode.render(SimpleNode.java:342) at org.xwiki.velocity.internal.DefaultVelocityEngine.evaluateInternal(DefaultVelocityEngine.java:256) at org.xwiki.velocity.internal.DefaultVelocityEngine.evaluate(DefaultVelocityEngine.java:222) ... 149 more Caused by: org.json.JSONException: JSON does not allow non-finite numbers. at org.json.JSONObject.testValidity(JSONObject.java:1538) at org.json.JSONObject.put(JSONObject.java:1291) at org.phenotips.measurements.internal.controller.MeasurementsController.writeJSON(MeasurementsController.java:235) at org.phenotips.data.internal.PhenoTipsPatient.toJSON(PhenoTipsPatient.java:363) at org.phenotips.data.internal.PhenoTipsPatient.toJSON(PhenoTipsPatient.java:293) at org.phenotips.data.internal.PhenoTipsPatient.toString(PhenoTipsPatient.java:570) at org.apache.velocity.runtime.parser.node.ASTReference.evaluate(ASTReference.java:547) ... 158 more