| | Gestational age in pedigree isn't saved | | | | | Fixed | Aug 20, 2019 | Jun 14, 2020 | | |
| | Improve handling of non-standard GEDCOM files | | | | | Done | Jul 12, 2019 | Jul 12, 2019 | | |
| | Pedigree editor triggers cross-origin frame errors when launched in an iframe | | | | | Fixed | Jul 12, 2019 | Jul 12, 2019 | | |
| | Some unit tests under org.phenotips.security fail due to cpu speed dependency | | | | | Fixed | Jul 12, 2019 | Jul 12, 2019 | | |
| | The list of phenotype suggestions may no longer include the exact match for a term | | | | | Cannot Reproduce | Jul 2, 2019 | Aug 27, 2019 | | |
| | It is impossible to set an individual in the pedigree as "Aborted", "Stillborn", "Miscarried", or "Unborn" | | | | | Duplicate | Jun 11, 2019 | Jun 11, 2019 | | |
| | In the pedigree editor, cancer labels are sometimes vertically offset from the relevant individual | | | | | Fixed | Jun 6, 2019 | Jun 17, 2019 | | |
| | Improve comment field behavior in IE11 in pedigree editor | | | | | Fixed | Jun 3, 2019 | Jun 17, 2019 | | |
| | Pedigree node life status not loaded from saved JSON | | | | | Fixed | May 31, 2019 | Dec 31, 2019 | | |
| | PhenoType suggestions are no longer available | | | | | Fixed | May 13, 2019 | May 14, 2019 | | |
| | Tooltips width is too narrow for genes dropdown | | | | | Fixed | May 9, 2019 | May 10, 2019 | | |
| | Every migrator that queries properties directly should clear cache at the end | | | | | Fixed | May 7, 2019 | May 14, 2019 | | |
| | Patient Solr index should include ENS IDs and not gene names in the index | | | | | Fixed | May 6, 2019 | May 14, 2019 | | |
| | Empty PubMedID are found after PhenoTips 1.3.10 upgrade to 1.4.6 | | | | | Fixed | May 3, 2019 | May 14, 2019 | | |
| | Reindexing HPO fails when an HPO term has more than one single value type field | | | | | Fixed | May 2, 2019 | May 15, 2019 | | |
| | Add the ability to set the livetable backend to a custom url | | | | | Fixed | Apr 26, 2019 | Apr 26, 2019 | | |
| | Allow translation files to be written in legible UTF-8 characters instead of unicode escapes | | | | | Fixed | Apr 26, 2019 | Apr 26, 2019 | | |
| | Font of the selected study turns white when in edit mode | | | | | Duplicate | Apr 25, 2019 | Apr 25, 2019 | | |
| | After visiting or while pressing a "secondary action" link, the text becomes white and therefore unreadable in the default color theme | | | | | Fixed | Apr 25, 2019 | Apr 26, 2019 | | |
| | Study descriptions are not rendered in the study selection dialog | | | | | Fixed | Apr 24, 2019 | Apr 26, 2019 | | |
| | Filtering by collaborator is not working in a workgroup's "Shared cases" tab | | | | | Fixed | Apr 16, 2019 | Apr 18, 2019 | | |
| | Matchable visibility is undefined on detailed access rights table | | | | | Fixed | Apr 15, 2019 | Apr 16, 2019 | | |
| | Incorrect access rights shown in UI | | | | | Fixed | Apr 15, 2019 | Apr 17, 2019 | | |
| | BOADICEA export breaks if an individual has a date of death specified without a year | | | | | Fixed | Apr 5, 2019 | Apr 17, 2019 | | |
| | If a gene name contains a colon Solr queries searching for the gene fail | | | | | Fixed | Apr 1, 2019 | Apr 17, 2019 | | |
| | Modifying a group name is not reflected on patient/match table | | | | | Fixed | Mar 22, 2019 | Apr 18, 2019 | | |
| | SolvedData throws NullPointerException on JSON import | | | | | Fixed | Mar 21, 2019 | Mar 22, 2019 | | |
| | Fetch correct group name in owner contact provider | | | | | Fixed | Mar 20, 2019 | Mar 22, 2019 | | |
| | PhenoTips 1.4.x builds have two batik versions present (1.8 and 1.10) | | | | | Fixed | Mar 15, 2019 | Mar 19, 2019 | | |
| | Quotes in user's name break the pedigree editor | | | | | Fixed | Mar 14, 2019 | Mar 18, 2019 | | |
| | The pedigree patient form section can cause configurations for other parts of the form to stop working | | | | | Fixed | Mar 14, 2019 | Mar 19, 2019 | | |
| | Exception thrown when trying to upgrade to 1.4.5 | | | | | Fixed | Mar 14, 2019 | Mar 14, 2019 | | |
| | Usernames on comments not displaying properly | | | | | Fixed | Mar 12, 2019 | Mar 19, 2019 | | |
| | "Tested Negative/Rejected Candidate" Gene breaks Pedigree Editor | | | | | Fixed | Mar 7, 2019 | Mar 11, 2019 | | |
| | Re-position Suggested Genes relatively to the Genotype information section in the Patient record form | | | | | Fixed | Feb 28, 2019 | Mar 12, 2019 | | |
| | Upgrade Solr to 7.7.0 | | | | | Fixed | Feb 27, 2019 | Mar 19, 2019 | | |
| | Reindexing ORDO fails | | | | | Fixed | Feb 27, 2019 | Feb 28, 2019 | | |
| | Unable to delete gene in a certain situation | | | | | Duplicate | Feb 22, 2019 | Feb 22, 2019 | | |
| | Gene deletion on the patient form may delete incorrect genes | | | | | Fixed | Feb 22, 2019 | Jul 4, 2019 | | |
| | Implement an event listener that cleans up leading and trailing spaces and ensures the prefix "c." is lowercase in variants' cDNA field when data is saved | | | | | Fixed | Feb 15, 2019 | Jul 25, 2019 | | |
| | Write a migrator to clean up leading and trailing spaces and to ensure the prefix "c." is lowercase in variants' cDNA field | | | | | Fixed | Feb 15, 2019 | Jul 25, 2019 | | |
| | When a patient is imported via JSON an empty PubmedID is not discarded | | | | | Fixed | Feb 14, 2019 | Mar 21, 2019 | | |
| | The variant's cDNA field may contain extra spaces and wrong prefixes | | | | | Fixed | Feb 11, 2019 | Mar 4, 2019 | | |
| | Profile urls should be generated on the backend | | | | | Fixed | Feb 7, 2019 | Mar 21, 2019 | | |
| | Add URL to contact providers | | | | | Fixed | Feb 6, 2019 | Mar 19, 2019 | | |
| | Include whitespace separator in parsing multiple emails in ContactInfo | | | | | Fixed | Feb 6, 2019 | Feb 7, 2019 | | |
| | Solr does not index patients until a full reindex is executed | | | | | Fixed | Jan 31, 2019 | Feb 21, 2019 | | |
| | In the patients directory, filter values containing "[" cause an exception in HSQLDB and Derby backends | | | | | Fixed | Jan 17, 2019 | Jan 20, 2019 | | |
| | Patient records entered in PhenoTips <1.4rc2 that has been upgraded to a version >= 1.4rc2 may have an empty PubMed ID | | | | | Fixed | Jan 16, 2019 | Feb 15, 2019 | | |
| | Infantile/childhood/juvenile onsets disappeared from Global age of onset field | | | | | Fixed | Jan 9, 2019 | Feb 8, 2019 | | |
