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  1. PT-3928

Infantile/childhood/juvenile onsets disappeared from Global age of onset field

    Details

    • Type: Bug
    • Status: Closed
    • Priority: Medium
    • Resolution: Fixed
    • Affects Version/s: 1.3.9, 1.4.3
    • Fix Version/s: 1.3.10, 1.4.4, 1.5-milestone-1
    • Component/s: None
    • Labels:
      None
    • Sprint:

      Description

      As shown below, the infantile/childhood/juvenile onsets have disappeared in some PhenoTips instances:

      The issue appears to be caused by the way the Onset branch of the HPO was reorganized in the latest (2018-12-21) release. Specifically, Infantile [HP:0003593], Childhood [HP:0011463], and Juvenile [HP:0003621] onsets are now children of a new term, Pediatric onset [HP:0410280].

      The HPOBranchDisplayer only displays top-level terms, so the absence of this new term causes all three children to not appear. The new term, "HP:0410280", needs to be added to the PhenoTips.PatientClass global_age_of_onset list of terms, as well as in the PhenoTips.PhenotypeMetaClass.

        Attachments

        1. expected.jpg
          22 kB
          Sasha Andjic
        2. missing.jpg
          24 kB
          Sasha Andjic
        3. Screen Shot 2019-01-09 at 4.53.45 PM.png
          35 kB
          Orion Buske

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            People

            • Assignee:
              buske Orion Buske
              Reporter:
              buske Orion Buske
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              Dates

              • Created:
                Updated:
                Resolved: