Remove redundant options from Excel export dialog

Description

Remove:

  • Clinical diagnosis (ORDO) (ontology term ID)

  • Clinical diagnosis (ORDO) (ontology term ID and term name)

  • Final diagnosis (OMIM) (ontology term ID)

  • Final diagnosis (OMIM) (ontology term ID and term name)

  • Clinical symptoms & physical findings (ontology term ID)

  • Clinical symptoms & physical findings (ontology term ID and term name)

  • Clinical symptoms & physical findings (ontology term and metadata IDs)

  • Symptoms NOT observed in this patient

  • Symptoms NOT observed in this patient (ontology term ID)

  • Symptoms NOT observed in this patient (ontology term ID and term name)

  • Prenatal and Perinatal History (ontology term ID)

  • Prenatal and Perinatal History (ontology term ID and term name)

  • Prenatal symptoms NOT observed in this patient

  • Gene status

  • Gene strategy

  • Gene comments

  • Variant protein

  • Variant transcript

  • Variant dbSNP

  • Variant zygosity

  • Variant effect

  • Variant interpretation (ACMG category)

  • Variant inheritance

  • Variant evidence

  • Variant segregation studies

  • Variant sanger validation

  • Variant coordinates

  • "APGAR score (1 minute)" & "APGAR score (5 minutes)" becomes a single "APGAR scores"

Rename: "Clinical symptoms & physical findings (ontology term and metadata names)" to "Clinical symptoms & physical findings qualifiers"

All diagnoses and phenotypes should export:

  • the ontology term

  • the ontology id

  • phenotypes observed and not observed

Environment

None

Status

Assignee

Alexander Lapena

Reporter

Sasha Andjic

Labels

None

External issue ID

None

External issue ID

None

Epic Link

Components

Fix versions

Priority

Medium