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  1. PhenoTips
  2. PT-3061

Annotate ORPHANET disorders with HPO symptoms

    Details

    • Type: Improvement
    • Status: Closed
    • Priority: Medium
    • Resolution: Fixed
    • Affects Version/s: None
    • Fix Version/s: 1.3-rc-1
    • Component/s: None
    • Labels:
      None
    • Sprint:

      Description

      Source: http://compbio.charite.de/jenkins/job/hpo.annotations/lastStableBuild/

      • phenotype_annotation.tab
      • negative_phenotype_annotation.tab

      Similarly to what we have for the OMIM vocabulary, for each disorder:

      • actual_symptom fields will contain the annotations from phenotype_annotation.tab
      • symptom fields will store all ancestors of actual_symptoms
      • actual_not_symptom will contain the annotations from negative_phenotype_annotation.tab

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            • Assignee:
              alina Alina Gvo
              Reporter:
              marta Marta Girdea
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              • Created:
                Updated:
                Resolved: